The Hydrogen Bond Propensity tool (accessed from within Mercury) accepts molecular input in a wide variety of formats. If you simply want to assess the potential hydrogen bonding landscape for a molecule, you can load a 2D molecular description (MOL format) into Mercury or a 3D molecular conformation (e.g. in MOL2, XYZ or PDB format). In order to assess a known structure within the context of a hydrogen bonding landscape you will need to load into Mercury's visualiser a file with a full crystallographic description such as CIF, MOL2, RES or PDB.
Was this article helpful?
That’s Great!
Thank you for your feedback
Sorry! We couldn't be helpful
Thank you for your feedback
Feedback sent
We appreciate your effort and will try to fix the article